Class Fingerprint

    • Constructor Detail

      • Fingerprint

        public Fingerprint​(String sample,
                           Path source,
                           String info)
    • Method Detail

      • getSample

        public String getSample()
      • getSource

        public Path getSource()
      • getInfo

        public String getInfo()
      • getPrintableId

        public String getPrintableId()
      • merge

        public void merge​(Fingerprint other)
        Merges the likelihoods from the supplied Fingerprint into the likelihoods for this fingerprint.
      • filterSuspectSites

        public void filterSuspectSites()
        Attempts to filter out haplotypes that may have suspect genotyping by removing haplotypes that reach a minimum confidence score yet have a significant fraction of observations from a third or fourth allele.