Constructor and Description |
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Association(FbcPkgNamespaces fbcns)
Creates a new
Association with the given FbcPkgNamespaces object. |
Association(XMLNode node,
FbcPkgNamespaces fbcns)
Creates a new
Association with the given FbcPkgNamespaces object,
and constructed to mimic the XMLNode: a '<gene>' node
argument will result in a
GENE_ASSOCIATION node; an
<and> node argument will result in a
AND_ASSOCIATION node; an
<or> node argument will result in a
OR_ASSOCIATION node. |
FbcAnd(FbcPkgNamespaces fbcns)
Creates a new
FbcAnd with the given FbcPkgNamespaces object. |
FbcAssociation(FbcPkgNamespaces fbcns)
Creates a new
FbcAssociation with the given FbcPkgNamespaces object. |
FbcModelPlugin(java.lang.String uri,
java.lang.String prefix,
FbcPkgNamespaces fbcns)
Creates a new
FbcModelPlugin object using the given parameters. |
FbcOr(FbcPkgNamespaces fbcns)
Creates a new
FbcOr with the given FbcPkgNamespaces object. |
FbcPkgNamespaces(FbcPkgNamespaces orig) |
FbcReactionPlugin(java.lang.String uri,
java.lang.String prefix,
FbcPkgNamespaces fbcns)
Creates a new
FbcReactionPlugin object using the given parameters. |
FbcSpeciesPlugin(java.lang.String uri,
java.lang.String prefix,
FbcPkgNamespaces fbcns)
Creates a new
FbcSpeciesPlugin |
FluxBound(FbcPkgNamespaces fbcns)
Creates a new
FluxBound with the given FbcPkgNamespaces object. |
FluxObjective(FbcPkgNamespaces fbcns)
Creates a new
FluxObjective with the given FbcPkgNamespaces object. |
GeneAssociation(FbcPkgNamespaces fbcns)
Creates a new
GeneAssociation with the given FbcPkgNamespaces object. |
GeneAssociation(XMLNode node,
FbcPkgNamespaces fbcns)
|
GeneProduct(FbcPkgNamespaces fbcns)
Creates a new
GeneProduct with the given FbcPkgNamespaces object. |
GeneProductAssociation(FbcPkgNamespaces fbcns)
Creates a new
GeneProductAssociation with the given FbcPkgNamespaces
object. |
GeneProductRef(FbcPkgNamespaces fbcns)
Creates a new
GeneProductRef with the given FbcPkgNamespaces object. |
ListOfFbcAssociations(FbcPkgNamespaces fbcns)
Creates a new
ListOfFbcAssociations with the given FbcPkgNamespaces
object. |
ListOfFluxBounds(FbcPkgNamespaces fbcns)
Creates a new
ListOfFluxBounds with the given FbcPkgNamespaces object. |
ListOfFluxObjectives(FbcPkgNamespaces fbcns)
Creates a new
ListOfFluxObjectives with the given FbcPkgNamespaces object. |
ListOfGeneAssociations(FbcPkgNamespaces fbcns)
Creates a new
ListOfGeneAssociations with the given FbcPkgNamespaces object. |
ListOfGeneProducts(FbcPkgNamespaces fbcns)
Creates a new
ListOfGeneProducts with the given FbcPkgNamespaces object. |
ListOfObjectives(FbcPkgNamespaces fbcns)
Creates a new
ListOfObjectives with the given FbcPkgNamespaces object. |
Objective(FbcPkgNamespaces fbcns)
Creates a new
Objective with the given FbcPkgNamespaces object. |